基因数据库下载

下面是Ensembl上的基因数据库下载,主要是哺乳动物,包括基因组序列,核酸序列,蛋白序列,及这些序列在EMBL和NCBI上的注释,还有提供的MYSQL数据库文件,并对物种名称做了一下简单的翻译,方便查找。如果要查找更详细的情况,可以直接上EMBL的网站。

Translate Species DNA cDNA ncRNA Protein sequence Annotated sequence (EMBL) Annotated sequence (GenBank) Gene sets
Human
Homo sapiens
FASTA FASTA FASTA FASTA EMBL GenBank GTF
小鼠 Mouse
Mus musculus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
斑马鱼 Zebrafish
Danio rerio
FASTA FASTA FASTA FASTA EMBL GenBank GTF
羊驼 Alpaca
Vicugna pacos
FASTA FASTA FASTA FASTA EMBL GenBank GTF
变色龙 Anole lizard
Anolis carolinensis
FASTA FASTA FASTA FASTA EMBL GenBank GTF
穿山甲 Armadillo
Dasypus novemcinctus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
丛猴 Bushbaby
Otolemur garnettii
FASTA FASTA FASTA FASTA EMBL GenBank GTF
玻璃海鞘 C.intestinalis
Ciona intestinalis
FASTA FASTA FASTA FASTA EMBL GenBank GTF
萨氏海鞘 C.savignyi
Ciona savignyi
FASTA FASTA FASTA FASTA EMBL GenBank GTF
线虫 Caenorhabditis elegans
Caenorhabditis elegans
FASTA FASTA FASTA FASTA EMBL GenBank GTF
Cat
Felis catus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
Chicken
Gallus gallus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
黑猩猩 Chimpanzee
Pan troglodytes
FASTA FASTA FASTA FASTA EMBL GenBank GTF
中国鳖 Chinese softshell turtle
Pelodiscus sinensis
FASTA FASTA FASTA FASTA EMBL GenBank GTF
鳕鱼 Cod
Gadus morhua
FASTA FASTA FASTA FASTA EMBL GenBank GTF
腔棘鱼 Coelacanth
Latimeria chalumnae
FASTA FASTA FASTA FASTA EMBL GenBank GTF
奶牛 Cow
Bos taurus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
Dog
Canis lupus familiaris
FASTA FASTA FASTA FASTA EMBL GenBank GTF
海豚 Dolphin
Tursiops truncatus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
Elephant
Loxodonta africana
FASTA FASTA FASTA FASTA EMBL GenBank GTF
雪貂 Ferret
Mustela putorius furo
FASTA FASTA FASTA FASTA EMBL GenBank GTF
果蝇 Fruitfly
Drosophila melanogaster
FASTA FASTA FASTA FASTA EMBL GenBank GTF
河豚 Fugu
Takifugu rubripes
FASTA FASTA FASTA FASTA EMBL GenBank GTF
长臂猿 Gibbon
Nomascus leucogenys
FASTA FASTA FASTA FASTA EMBL GenBank GTF
大猩猩 Gorilla
Gorilla gorilla gorilla
FASTA FASTA FASTA FASTA EMBL GenBank GTF
豚鼠 Guinea Pig
Cavia porcellus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
刺猬 Hedgehog
Erinaceus europaeus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
Horse
Equus caballus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
蹄兔 Hyrax
Procavia capensis
FASTA FASTA FASTA FASTA EMBL GenBank GTF
长鼻袋鼠 Kangaroo rat
Dipodomys ordii
FASTA FASTA FASTA FASTA EMBL GenBank GTF
七鳃鳗 Lamprey
Petromyzon marinus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
小刺猬猬 Lesser hedgehog tenrec
Echinops telfairi
FASTA FASTA FASTA FASTA EMBL GenBank GTF
猕猴 Macaque
Macaca mulatta
FASTA FASTA FASTA FASTA EMBL GenBank GTF
狨猴 Marmoset
Callithrix jacchus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
青鳉 Medaka
Oryzias latipes
FASTA FASTA FASTA FASTA EMBL GenBank GTF
狐蝠科 Megabat
Pteropus vampyrus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
蝙蝠 Microbat
Myotis lucifugus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
鼠狐猴 Mouse Lemur
Microcebus murinus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
负鼠 Opossum
Monodelphis domestica
FASTA FASTA FASTA FASTA EMBL GenBank GTF
猩猩 Orangutan
Pongo abelii
FASTA FASTA FASTA FASTA EMBL GenBank GTF
熊猫 Panda
Ailuropoda melanoleuca
FASTA FASTA FASTA FASTA EMBL GenBank GTF
Pig
Sus scrofa
FASTA FASTA FASTA FASTA EMBL GenBank GTF
鼠兔 Pika
Ochotona princeps
FASTA FASTA FASTA FASTA EMBL GenBank GTF
剑尾鱼 Platyfish
Xiphophorus maculatus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
鸭嘴兽 Platypus
Ornithorhynchus anatinus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
Rabbit
Oryctolagus cuniculus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
大鼠 Rat
Rattus norvegicus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
酿酒酵母 Saccharomyces cerevisiae
Saccharomyces cerevisiae
FASTA FASTA FASTA FASTA EMBL GenBank GTF
鼩鼱 Shrew
Sorex araneus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
树懒 Sloth
Choloepus hoffmanni
FASTA FASTA FASTA FASTA EMBL GenBank GTF
松鼠 Squirrel
Ictidomys tridecemlineatus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
棘鱼 Stickleback
Gasterosteus aculeatus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
眼镜猴 Tarsier
Tarsius syrichta
FASTA FASTA FASTA FASTA EMBL GenBank GTF
袋獾 Tasmanian devil
Sarcophilus harrisii
FASTA FASTA FASTA FASTA EMBL GenBank GTF
Tetraodon
Tetraodon nigroviridis
FASTA FASTA FASTA FASTA EMBL GenBank GTF
罗非鱼 Tilapia
Oreochromis niloticus
FASTA FASTA FASTA FASTA EMBL GenBank GTF
树鼩 Tree Shrew
Tupaia belangeri
FASTA FASTA FASTA FASTA EMBL GenBank GTF
火鸡 Turkey
Meleagris gallopavo
FASTA FASTA FASTA FASTA EMBL GenBank GTF
袋鼠 Wallaby
Macropus eugenii
FASTA FASTA FASTA FASTA EMBL GenBank GTF
非洲爪蟾蜍 Xenopus
Xenopus tropicalis
FASTA FASTA FASTA FASTA EMBL GenBank GTF
斑胸草雀 Zebra Finch
Taeniopygia guttata
FASTA FASTA FASTA FASTA EMBL GenBank GTF

发表评论

电子邮件地址不会被公开。